Package: ValidationExplorer 0.1.1

ValidationExplorer: Simulation-Based Tools for Bioacoustic Study Design

Many bioacoustic data workflows rely on manual review (i.e., validation) of a subset of call files to provide information to statistical models that account for misclassification by automated algorithms. Because manual review can be prohibitively expensive, simulation can be a valuable tool to aid the design of studies that use validation. This package provides user-friendly functions to reduce the programming burden of simulation studies that compare validation sampling designs. Simulations assume the count-detection model, which is a realistic model for bioacoustic data, especially for bats. For more information, see Oram et al. (2025) <doi:10.1214/25-AOAS2096>.

Authors:Jacob Oram [aut, cre, cph], Katharine Banner [aut], Christian Stratton [aut], Kathryn Irvine [aut]

ValidationExplorer_0.1.1.tar.gz
ValidationExplorer_0.1.1.zip(r-4.7)ValidationExplorer_0.1.1.zip(r-4.6)ValidationExplorer_0.1.1.zip(r-4.5)
ValidationExplorer_0.1.1.tgz(r-4.6-any)ValidationExplorer_0.1.1.tgz(r-4.5-any)
ValidationExplorer_0.1.1.tar.gz(r-4.7-any)ValidationExplorer_0.1.1.tar.gz(r-4.6-any)
ValidationExplorer_0.1.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
ValidationExplorer/json (API)
NEWS

# Install 'ValidationExplorer' in R:
install.packages('ValidationExplorer', repos = c('https://j-oram.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/j-oram/validationexplorer/issues

Pkgdown/docs site:https://j-oram.github.io

Datasets:

On CRAN:

Conda:

3.90 score 1 stars 3 scripts 16 exports 60 dependencies

Last updated from:71366175f2. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK231
source / vignettesOK252
linux-release-x86_64OK193
macos-release-arm64OK235
macos-oldrel-arm64OK184
windows-develOK162
windows-releaseOK149
windows-oldrelOK170
wasm-releaseOK172

Exports:%>%%notin%make_not_confirmablemask_by_sppmask_FE_all_visitsmcmc_sumplot_bias_vs_callsplot_coverage_vs_callsplot_width_vs_callsrun_simssim_datsimulate_validatedDatasummarize_n_validatedtune_mcmcvisualize_parameter_groupvisualize_single_parameter

Dependencies:abindbackportsBHcallrcheckmateclicodacpp11descdistributionaldplyrfarvergenericsggplot2gluegridExtragtableigraphinlineisobandlabelinglatticelifecycleloomagrittrMatrixmatrixStatsnimblenumDerivotelpillarpkgbuildpkgconfigposteriorpracmaprocessxpspurrrQuickJSRR6RColorBrewerRcppRcppEigenRcppParallelrlangrstanS7scalesStanHeadersstringistringrtensorAtibbletidyrtidyselectutf8vctrsviridisviridisLitewithr